CDS
| Accession Number | TCMCG009C19467 |
| gbkey | CDS |
| Protein Id | XP_030477800.1 |
| Location | complement(join(42207719..42208023,42208390..42208556,42208804..42209606,42209698..42209922,42210030..42210167,42210252..42210336,42210488..42210546,42210789..42211010,42211108..42211179,42211348..42211460,42211925..42212090,42212397..42212516,42212924..42213067,42213148..42213180)) |
| Gene | LOC115694840 |
| GeneID | 115694840 |
| Organism | Cannabis sativa |
Protein
| Length | 883aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA560384 |
| db_source | XM_030621940.1 |
| Definition | protein RRC1 isoform X2 [Cannabis sativa] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | U2 snRNP-associated SURP motif-containing |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12842
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCATCCAAGGGAAAAGAATCTGAGAAGAAAAAGGAGGAGGAGAAGCCAAGGGAGAGAGAAAAAGGGAAGTCTCGAAACATAGATCATTTTATGGAGGAACTGAAGCATGAGCAAGAGTTGAGGGAGAGGCGAAATCAAGATCGTGATCAATGGCGTCATAATGATAATTCTGCTCTATCTAGTCGCTTTGATGAGCTGCCTGATGAGTTTGATCCAAGTGGCAAATTGGCTGGATCATTTGATGATGGAGATCCACAGACTACAAATCTATATGTTGGAAATCTCTCACCGCAGGTTGATGAAAATTTTCTCTTGCGAACATTTGGAAGATTTGGACCTATTGCTAGTGTAAAGATAATGTGGCCTAGAACAGAAGAGGAGAGGAGGCGCCAAAGAAATTGTGGTTTTGTTGCTTTCATGAACAGAACCGATGGGCAGGCTGCAAAGGATGAAATGCAAGGTGTGGTAGTTTATGAGTATGAGTTGAAGATTGGATGGGGCAAGTCTGTTGCTTTGCCTTCACAAGCACTTCCTGCTCCTCCACCAGGACAGATGGCCATCAGGAGTAAAGAGGGTGCCACGGTAGTACTTTCTGGTCCATCAGGTCCACCAGTCCCTTCTGTTCCAAATCAAAATTCTGAACTGGTTCTTACTCCAAATGTTCCTGATATAACCGTTGTTCCACCTGAGGATGGTAAACTCCGCCATGTTATTGATACAATGGCTTTATATGTTTTGGATGGAGGCTGTGCCTTTGAACAAGCTATTATGGAGAGAGGTCGAGGGAACCCACTTTTCAACTTCTTATTTGAGCTCGGCTCCAAGGAACATACGTACTATGTTTGGAGGCTTTATTCATTTGCTCAGGGTGATACTTTGCAAAGGTGGCGAACAGAACCTTTCATCATGATAACTGGCAGTGGAAGATGGATTCCACCTCTACTGCCAATAGCGAAAAGCCCTGATCTTGAAAAGGAGTCTGGTGCAACATATGCTGCAGGAAGAAGCAGGCGTGTAGAGCCAGAAAGAACCCTGACGGACTCACAGAGAGATGAGTTTGAGGATATGTTACGTGCATTAACATTAGAGAGGAGTCAAATAAAAGAAGCTATGGGATTTTCATTGGATAATGCCGACGCTGCCGGGGAGATAGTGGAAGTTCTCACAGAATCTTTGACACTTAAAGAGACTCCAATCCCAACTAAAGTGGCAAGGCTCATGCTTGTCTCTGATGTGCTTCATAACAGTAGTGCTCCTGTAAAGAATGCATCTGCATACCGTACCAAATTTGAGGCTACATTGCCAGATATAATGGAGAGCTTTAACGATTTGTATCGTAGTGTTACTGGAAGGATCACTGCTGAGGCCCTTAAGGAAAGAGTTATGAAGGTATTGCAAGTATGGGCAGACTGGTTTCTTTTCTCTGATGCATATGTTAATGGTTTAAGAGCTACTTTTCTTCGATCGGGAAACTCTGGTGTGGTCCCTTTCCACTCCATATGTGGTGACACACCAGAGATAGAAAAAAGGACTGGTTCTGCAGATCTGGGTGATGCAAATAAGACCAACCAAGATGCTGCTCTTGCAATGGGAAAAGGAGCAGCTGTGCAAGAGTTAATGAGCCTTCCCTTTGCTGAATTGGAAAGACGTTGCAGACATAACGGATTGTCTCTTGTTGGTGGTCGAGAAATGATGGTTGCACGATTGTTGAGTCTGGAAGAGGCAGAAAAGCAGAGGGGTTTTGAGCTAGATGATGACTTGAAACAGGTTCAAAGCCACTCAAGTTCAGGTAGATATTCTGGTAGCAAAAAAGAAATGAATGTCGAAGCTGAGCCTGCAGCATTGTCTGGATGGAGTCATTATGCAGAGAATGAAATGGAGTCTCAAGGGAAAGGGTTGGTAACTTTATCCCATACACTTCCGATTCCACAGCCTGAACTAAAGGCATACATGAAGAAAGAGAAGATTGATCCTATTTTGCCAGCTTCCAAATGGGCTCGAGAGGATGATGATAGTGATGAGGAACAGAAGAGAAGTACCACGGGTCTTGGTTTAAGCTACTCATCTTCTGGAAGTGAGAATATTGGTGATGGTCCTAGTAAGGCTGATGATATGGATTCTGCAATAGATTCATGCATTACTGCACAACCTGAGAGTGGAATAAGCGAGGAGCAGAGGAAAAGGTTGAGACGTCTAGAAGCTGCCTTGATTGAATATCGCGAGTCTCTTGAGGAAAGGGGAATAAAATCTCATGAAGAAATTGAGAGGAAAGTAGCGATTCATCGTAAACGGCTGGAATCAGAGTATGGTTTGTCTGTTTCGAACGTAGATGCTTCTGGGAATAAAAAAGCATCTTTGGATCGGAAAGACAGACGGGATAACAGCCATGAAACATCAAGAAAACGACACCGCAGCCACAGCAGAAGTGGTAGCCCCATTCGGAGGTCATCATCCATTAGAGAGCGGGAAAGGGAGCATGATTTAGACAGGGACCGTGAAAAACATAGGGATAGGGACAGAGATAAAGGGCATGATTTTGAAAATGAAAGGGGGAGAGAGCGGGAGAAGAGTGGAAGTAGAGAAAGAGATGATCATGAGAGGGAGAAAGGCAGAGAGAGAGAGAGAGAGAGGAGGAGGCGAATGAAATGA |
| Protein: MASKGKESEKKKEEEKPREREKGKSRNIDHFMEELKHEQELRERRNQDRDQWRHNDNSALSSRFDELPDEFDPSGKLAGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRTDGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGATVVLSGPSGPPVPSVPNQNSELVLTPNVPDITVVPPEDGKLRHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPLLPIAKSPDLEKESGATYAAGRSRRVEPERTLTDSQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAGEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSVTGRITAEALKERVMKVLQVWADWFLFSDAYVNGLRATFLRSGNSGVVPFHSICGDTPEIEKRTGSADLGDANKTNQDAALAMGKGAAVQELMSLPFAELERRCRHNGLSLVGGREMMVARLLSLEEAEKQRGFELDDDLKQVQSHSSSGRYSGSKKEMNVEAEPAALSGWSHYAENEMESQGKGLVTLSHTLPIPQPELKAYMKKEKIDPILPASKWAREDDDSDEEQKRSTTGLGLSYSSSGSENIGDGPSKADDMDSAIDSCITAQPESGISEEQRKRLRRLEAALIEYRESLEERGIKSHEEIERKVAIHRKRLESEYGLSVSNVDASGNKKASLDRKDRRDNSHETSRKRHRSHSRSGSPIRRSSSIREREREHDLDRDREKHRDRDRDKGHDFENERGREREKSGSRERDDHEREKGRERERERRRRMK |